CDS

Accession Number TCMCG057C08497
gbkey CDS
Protein Id XP_018467961.1
Location complement(join(34721843..34722169,34722270..34722410,34722480..34723487))
Gene LOC108839686
GeneID 108839686
Organism Raphanus sativus

Protein

Length 491aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018612459.1
Definition PREDICTED: F-box/LRR-repeat protein At1g48400-like isoform X2 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category S
Description positive regulation of bicellular tight junction assembly
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K19657        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0001654        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003008        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005198        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005815        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005856        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0005923        [VIEW IN EMBL-EBI]
GO:0005929        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007010        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007155        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007276        [VIEW IN EMBL-EBI]
GO:0007283        [VIEW IN EMBL-EBI]
GO:0007399        [VIEW IN EMBL-EBI]
GO:0007423        [VIEW IN EMBL-EBI]
GO:0007568        [VIEW IN EMBL-EBI]
GO:0007588        [VIEW IN EMBL-EBI]
GO:0007610        [VIEW IN EMBL-EBI]
GO:0007617        [VIEW IN EMBL-EBI]
GO:0007618        [VIEW IN EMBL-EBI]
GO:0007626        [VIEW IN EMBL-EBI]
GO:0007632        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008340        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010259        [VIEW IN EMBL-EBI]
GO:0015630        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0019098        [VIEW IN EMBL-EBI]
GO:0019953        [VIEW IN EMBL-EBI]
GO:0022008        [VIEW IN EMBL-EBI]
GO:0022406        [VIEW IN EMBL-EBI]
GO:0022412        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0022610        [VIEW IN EMBL-EBI]
GO:0023041        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0030029        [VIEW IN EMBL-EBI]
GO:0030030        [VIEW IN EMBL-EBI]
GO:0030031        [VIEW IN EMBL-EBI]
GO:0030036        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0030182        [VIEW IN EMBL-EBI]
GO:0031514        [VIEW IN EMBL-EBI]
GO:0032391        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032504        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034606        [VIEW IN EMBL-EBI]
GO:0034607        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0035178        [VIEW IN EMBL-EBI]
GO:0035845        [VIEW IN EMBL-EBI]
GO:0035869        [VIEW IN EMBL-EBI]
GO:0036064        [VIEW IN EMBL-EBI]
GO:0042461        [VIEW IN EMBL-EBI]
GO:0042995        [VIEW IN EMBL-EBI]
GO:0043005        [VIEW IN EMBL-EBI]
GO:0043010        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043296        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044087        [VIEW IN EMBL-EBI]
GO:0044089        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044430        [VIEW IN EMBL-EBI]
GO:0044441        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044463        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044703        [VIEW IN EMBL-EBI]
GO:0044782        [VIEW IN EMBL-EBI]
GO:0046530        [VIEW IN EMBL-EBI]
GO:0048232        [VIEW IN EMBL-EBI]
GO:0048468        [VIEW IN EMBL-EBI]
GO:0048513        [VIEW IN EMBL-EBI]
GO:0048515        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048609        [VIEW IN EMBL-EBI]
GO:0048666        [VIEW IN EMBL-EBI]
GO:0048699        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051130        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051640        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060041        [VIEW IN EMBL-EBI]
GO:0060179        [VIEW IN EMBL-EBI]
GO:0060271        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070160        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0070925        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0097458        [VIEW IN EMBL-EBI]
GO:0097546        [VIEW IN EMBL-EBI]
GO:0097711        [VIEW IN EMBL-EBI]
GO:0097730        [VIEW IN EMBL-EBI]
GO:0097731        [VIEW IN EMBL-EBI]
GO:0097733        [VIEW IN EMBL-EBI]
GO:0098609        [VIEW IN EMBL-EBI]
GO:0120025        [VIEW IN EMBL-EBI]
GO:0120031        [VIEW IN EMBL-EBI]
GO:0120036        [VIEW IN EMBL-EBI]
GO:0120038        [VIEW IN EMBL-EBI]
GO:0140056        [VIEW IN EMBL-EBI]
GO:1901888        [VIEW IN EMBL-EBI]
GO:1901890        [VIEW IN EMBL-EBI]
GO:1903348        [VIEW IN EMBL-EBI]
GO:1905515        [VIEW IN EMBL-EBI]
GO:2000810        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGGGATTTAATCAGCAGTTTGCCAGATGAGATTCTTGGCAAAATCCTGTCTTTGCTTCCGACAAAAGTGGCTGCTTCCACATCGGTTCTGTCCAAGAGGTGGAGGAATCTGCTGTCTCTCGTAGACAGCCTTAGTTTCGATGAGTCCATGGTTGTCTATCCCAACGAAGAAGAAGCAGAAAACGGTTCACACCGCTTCTCTGATTTCGTAGACAAAACACTTGCTCTGCTACACAACTCTCCCGCCATCAAGACATTCTCTCTGTGTCTTGTAGTTTGGACTGAATCTTCCCGTGTCAACCGTTGGATCTGGACTGCAATGGAAAAGGGTTTACTGGAACTACACTTGTACGCCCCTACCTCTGGTTCTGATGTTAGTATAGAATCTAGGGTACTAAGGAGTACCACACTGGTTAAGCTCACAATCTCCGGTCATTATGATATTGATGAAGATATTGACGAATCTCACGATGTGTTTCTCCCCGCCCTCAAATCACTTTCTCTGACGGTTGCGCTTGATATTGACCAATATCGCCGAATCATCCATGATGCTTGTCCTGTGCTGGAAGAGTTAACCATACGCAACGTGGACTTGGGGTCCCTTTGGGGGGGTACGGTTGTGGAACATGCATCCATCAAGCGTCTTGTGATTGTTACGCATGTTCCTGAGCATATTGACTACTATCTTTTGTTGGATTATTTCGAAAATGCTCGCCAAACAGTTCGTCTCCAAGCACCCAGTCTCGTCTACCTTGACTATTCTAGTCCTGTCTTTAAAGGGTATGTGGTTGGTGATTTGGATTCTCTTGTCGAAGCAAGGCTGAGTCTCAAGTTATGGAGGTCAACTAGTCATTACGATTTCGATGATGATTATAATTACGATTATCATGGTTCTCTTTCTGATCTTGATGATGATCCATGCCCGCCTATATTCGGTAACGTTACACGTCTTGTTGCTGCTATAAGAAACATTACCACCCTTCACTTGTCTCCTGATTCCCTTGAGGTGTTCCATTTCTGCTGTAAATCCATGCCTATGTTCAACAACCTTCTAAATTTGTCTATTGAGAGTAACAAGCAAAATGGCTGGCAAGTAATGCCACTTCTGCTCAAGTCTTGTCCAATTCTACAAACTTTACTCTTCAAGGGTCTTGTTCACAAAGTAACAAATAGATGCGGAGATGCATGCGTTTGCAGTCCAAGTCAGGAAGAGAGGAGGAGGATGGTTGTGAAAAAGAAGAAAGAAGAATGTTGTCTACAGACATGTGGGGTGAAGGTGCTAGAGATTTCAGACTATGGAGGTTGTTTTCAAGAGGTGGAACAGATGAGACATTTCTTGGGAAATTTGAAATGTCTCGAAACCGTAAAAGTTGGTGTTGATCCGGACAACAAAGGCAAGAATGCTGACTTCCTGCGAGCTAACCTAATGAATCTTCCCAAACTTTCATCAAAGTGCACTATTCAACTCCTCTAA
Protein:  
MRDLISSLPDEILGKILSLLPTKVAASTSVLSKRWRNLLSLVDSLSFDESMVVYPNEEEAENGSHRFSDFVDKTLALLHNSPAIKTFSLCLVVWTESSRVNRWIWTAMEKGLLELHLYAPTSGSDVSIESRVLRSTTLVKLTISGHYDIDEDIDESHDVFLPALKSLSLTVALDIDQYRRIIHDACPVLEELTIRNVDLGSLWGGTVVEHASIKRLVIVTHVPEHIDYYLLLDYFENARQTVRLQAPSLVYLDYSSPVFKGYVVGDLDSLVEARLSLKLWRSTSHYDFDDDYNYDYHGSLSDLDDDPCPPIFGNVTRLVAAIRNITTLHLSPDSLEVFHFCCKSMPMFNNLLNLSIESNKQNGWQVMPLLLKSCPILQTLLFKGLVHKVTNRCGDACVCSPSQEERRRMVVKKKKEECCLQTCGVKVLEISDYGGCFQEVEQMRHFLGNLKCLETVKVGVDPDNKGKNADFLRANLMNLPKLSSKCTIQLL